Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.66■□□□□ 0.42
SIX4Q9UIU6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 SPTSSB-204ENST00000617024 1292 ntBASIC17.66■□□□□ 0.42
SIX4Q9UIU6 LINC00628-201ENST00000628516 1289 ntBASIC17.66■□□□□ 0.42
SIX4Q9UIU6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIX4Q9UIU6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC026150.2-201ENST00000564693 1156 ntBASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC093028.1-201ENST00000622998 982 ntBASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AL589702.1-201ENST00000641229 1509 ntBASIC17.65■□□□□ 0.42
SIX4Q9UIU6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX4Q9UIU6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SIX4Q9UIU6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 AC084018.2-201ENST00000613093 2607 ntBASIC17.64■□□□□ 0.41
SIX4Q9UIU6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 AC098859.1-201ENST00000502915 1238 ntBASIC17.64■□□□□ 0.41
SIX4Q9UIU6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 ALG1L8P-201ENST00000533887 760 ntBASIC17.64■□□□□ 0.41
SIX4Q9UIU6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 AP3S2-216ENST00000617003 1561 ntBASIC17.64■□□□□ 0.41
SIX4Q9UIU6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX4Q9UIU6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX4Q9UIU6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms