Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 HCG4P8-203ENST00000443049 980 ntBASIC14.8□□□□□ -0.04
NLKQ9UBE8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC124947.2-201ENST00000547118 1133 ntBASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC011467.2-201ENST00000598425 242 ntBASIC14.8□□□□□ -0.04
NLKQ9UBE8 AL139327.4-201ENST00000612362 153 ntBASIC14.8□□□□□ -0.04
NLKQ9UBE8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NLKQ9UBE8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.8□□□□□ -0.04
NLKQ9UBE8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 AC126755.1-201ENST00000525846 6405 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 POM121L3P-201ENST00000419331 1163 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 AC103564.2-201ENST00000432853 1299 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 IGHV3-52-201ENST00000519770 353 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.79□□□□□ -0.04
NLKQ9UBE8 BNIP3P18-201ENST00000593976 575 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 AC099336.1-202ENST00000602961 463 ntBASIC14.79□□□□□ -0.04
NLKQ9UBE8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NLKQ9UBE8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
NLKQ9UBE8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NLKQ9UBE8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NLKQ9UBE8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NLKQ9UBE8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NLKQ9UBE8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.78□□□□□ -0.04
NLKQ9UBE8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.78□□□□□ -0.04
NLKQ9UBE8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NLKQ9UBE8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms