Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 AL031731.1-201ENST00000642131 2094 ntBASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 YBX1P5-201ENST00000509441 847 ntBASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CUEDC1Q9NWM3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 AC140658.5-201ENST00000438532 169 ntBASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 GGT4P-201ENST00000623672 1708 ntBASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CUEDC1Q9NWM3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CUEDC1Q9NWM3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms