Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.52□□□□□ -0.24
CTNNBIP1Q9NSA3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTNNBIP1Q9NSA3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CTNNBIP1Q9NSA3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTNNBIP1Q9NSA3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CTNNBIP1Q9NSA3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 KRT8P39-201ENST00000396270 1433 ntBASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 TSSC2-201ENST00000450217 709 ntBASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 POU5F1P6-201ENST00000466990 990 ntBASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 AL353135.1-201ENST00000606729 504 ntBASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTNNBIP1Q9NSA3 LINC00554-201ENST00000564841 3011 ntBASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 AL512652.2-201ENST00000625156 1716 ntBASIC13.5□□□□□ -0.25
CTNNBIP1Q9NSA3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms