Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 LYSMD4-203ENST00000378904 2122 ntBASIC15.13■□□□□ 0.01
CHD8Q9HCK8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AC134915.1-201ENST00000426461 574 ntBASIC15.13■□□□□ 0.01
CHD8Q9HCK8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 NUP210P1-202ENST00000504322 710 ntBASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AC005252.2-201ENST00000624630 1141 ntBASIC15.13■□□□□ 0.01
CHD8Q9HCK8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 TOP3BP1-201ENST00000420768 1380 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 BAATP1-201ENST00000412284 1225 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AL359711.2-201ENST00000563105 872 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AP001063.1-201ENST00000568332 529 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AL158212.4-201ENST00000624062 1286 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AZGP1P1-201ENST00000411909 902 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 HIST3H2BA-201ENST00000436555 524 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 SERPINA13P-202ENST00000478994 924 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AC138649.2-201ENST00000615886 705 ntBASIC15.12■□□□□ 0.01
CHD8Q9HCK8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD8Q9HCK8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 BRI3BPP1-201ENST00000594224 787 ntBASIC15.11■□□□□ 0.01
CHD8Q9HCK8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD8Q9HCK8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms