Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RNF41Q9H4P4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.52■□□□□ 0.71
RNF41Q9H4P4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF41Q9H4P4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF41Q9H4P4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.52■□□□□ 0.71
RNF41Q9H4P4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 RPS8P6-201ENST00000426177 609 ntBASIC19.51■□□□□ 0.71
RNF41Q9H4P4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 POU5F1P6-201ENST00000466990 990 ntBASIC19.51■□□□□ 0.71
RNF41Q9H4P4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 AL138918.1-201ENST00000568306 659 ntBASIC19.51■□□□□ 0.71
RNF41Q9H4P4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 AL596442.2-201ENST00000610240 980 ntBASIC19.51■□□□□ 0.71
RNF41Q9H4P4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF41Q9H4P4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AC005237.2-201ENST00000434368 219 ntBASIC19.5■□□□□ 0.71
RNF41Q9H4P4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AC069335.1-201ENST00000489972 472 ntBASIC19.5■□□□□ 0.71
RNF41Q9H4P4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AP001160.2-201ENST00000596071 487 ntBASIC19.5■□□□□ 0.71
RNF41Q9H4P4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AC084121.4-201ENST00000641598 221 ntBASIC19.5■□□□□ 0.71
RNF41Q9H4P4 AF228730.8-201ENST00000642140 221 ntBASIC19.5■□□□□ 0.71
RNF41Q9H4P4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF41Q9H4P4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 MIR346-201ENST00000362234 95 ntBASIC19.49■□□□□ 0.71
RNF41Q9H4P4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AL627223.1-201ENST00000416693 442 ntBASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AC093724.1-201ENST00000448659 1027 ntBASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AP000842.3-202ENST00000569238 1080 ntBASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF41Q9H4P4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms