Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 SLC22A20-204ENST00000530038 1673 ntBASIC14.82□□□□□ -0.04
NELFAQ9H3P2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 MIR940-201ENST00000401276 94 ntBASIC14.82□□□□□ -0.04
NELFAQ9H3P2 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 RNA5SP416-201ENST00000516838 111 ntBASIC14.82□□□□□ -0.04
NELFAQ9H3P2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NELFAQ9H3P2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 MIR4492-201ENST00000581627 80 ntBASIC14.81□□□□□ -0.04
NELFAQ9H3P2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 AP001350.2-201ENST00000625104 1094 ntBASIC14.81□□□□□ -0.04
NELFAQ9H3P2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NELFAQ9H3P2 UBALD1-205ENST00000590891 2641 ntBASIC14.8□□□□□ -0.04
NELFAQ9H3P2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 HCG4-201ENST00000418983 998 ntBASIC14.8□□□□□ -0.04
NELFAQ9H3P2 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.8□□□□□ -0.04
NELFAQ9H3P2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NELFAQ9H3P2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms