Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR3687-1-201ENST00000614492 61 ntBASIC15.39■□□□□ 0.05
UBQLN3Q9H347 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 C20orf181-201ENST00000623918 480 ntBASIC15.39■□□□□ 0.05
UBQLN3Q9H347 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AL513480.1-201ENST00000451731 511 ntBASIC15.38■□□□□ 0.05
UBQLN3Q9H347 YBX1P5-201ENST00000509441 847 ntBASIC15.38■□□□□ 0.05
UBQLN3Q9H347 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AC005412.3-201ENST00000580309 715 ntBASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AC055717.3-201ENST00000622967 595 ntBASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN3Q9H347 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 MKNK2P1-201ENST00000437526 628 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ALG1L5P-201ENST00000482043 771 ntBASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN3Q9H347 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms