Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.46■□□□□ 0.39
LHX5Q9H2C1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LHX5Q9H2C1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LHX5Q9H2C1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC211486.1-202ENST00000416371 468 ntBASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC093724.1-201ENST00000448659 1027 ntBASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC211476.1-201ENST00000503899 468 ntBASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC091812.2-201ENST00000619081 385 ntBASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LHX5Q9H2C1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 AC092902.6-201ENST00000641783 218 ntBASIC17.44■□□□□ 0.38
LHX5Q9H2C1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 AKAP8P1-201ENST00000434743 1349 ntBASIC17.44■□□□□ 0.38
LHX5Q9H2C1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LHX5Q9H2C1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms