Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBE2OQ9C0C9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 LINC00304-203ENST00000565008 1864 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 ELK2AP-201ENST00000392510 1007 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 MYCLP2-201ENST00000449268 967 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC007389.4-201ENST00000454674 793 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC055876.2-201ENST00000531834 546 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC103810.3-201ENST00000583567 96 ntBASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2OQ9C0C9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
UBE2OQ9C0C9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AC020907.1-201ENST00000616460 1350 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 BOLA2P3-201ENST00000404566 256 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 ZNF890P-202ENST00000530367 1156 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AL139327.4-201ENST00000612362 153 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AC004790.1-201ENST00000612686 536 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 AC012317.2-201ENST00000623305 2251 ntBASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2OQ9C0C9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms