Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AL512652.2-201ENST00000625156 1716 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SLC22A20-204ENST00000530038 1673 ntBASIC15.3■□□□□ 0.04
TRIM2Q9C040 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 AL049840.3-201ENST00000602669 611 ntBASIC15.3■□□□□ 0.04
TRIM2Q9C040 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM2Q9C040 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM2Q9C040 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AL671710.1-201ENST00000610245 2349 ntBASIC15.29■□□□□ 0.04
TRIM2Q9C040 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.29■□□□□ 0.04
TRIM2Q9C040 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 SLC25A1P1-201ENST00000528351 927 ntBASIC15.29■□□□□ 0.04
TRIM2Q9C040 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 AL671883.3-201ENST00000603274 991 ntBASIC15.29■□□□□ 0.04
TRIM2Q9C040 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.29■□□□□ 0.04
TRIM2Q9C040 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms