Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC3Q9BY71 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.22■□□□□ 0.35
LRRC3Q9BY71 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AC009477.1-201ENST00000452936 217 ntBASIC17.22■□□□□ 0.35
LRRC3Q9BY71 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AL133215.2-201ENST00000609242 977 ntBASIC17.22■□□□□ 0.35
LRRC3Q9BY71 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AL035456.1-201ENST00000456064 1369 ntBASIC17.22■□□□□ 0.35
LRRC3Q9BY71 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC3Q9BY71 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 AD000864.1-201ENST00000624076 2295 ntBASIC17.21■□□□□ 0.35
LRRC3Q9BY71 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 AC022144.1-201ENST00000602255 1580 ntBASIC17.21■□□□□ 0.35
LRRC3Q9BY71 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 RN7SL828P-201ENST00000607615 303 ntBASIC17.21■□□□□ 0.35
LRRC3Q9BY71 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3Q9BY71 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
LRRC3Q9BY71 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
LRRC3Q9BY71 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC3Q9BY71 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms