Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 AC004461.1-201ENST00000412461 403 ntBASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 KRT18P28-201ENST00000453838 1332 ntBASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 AC006277.1-201ENST00000624348 1610 ntBASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP3Q9BWW4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC046158.3-201ENST00000624947 2558 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 WASH6P-202ENST00000359512 1437 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 PMS2P2-201ENST00000425039 1128 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 METTL21AP1-201ENST00000438852 635 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC013467.2-201ENST00000605472 835 ntBASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP3Q9BWW4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms