Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC009949.1-201ENST00000623048 1830 ntBASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC023274.1-201ENST00000418278 595 ntBASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC112482.1-201ENST00000492080 688 ntBASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 STK19B-204ENST00000512515 211 ntBASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CRYGEP-201ENST00000412192 528 ntBASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 MTDHP5-201ENST00000598980 586 ntBASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF4Q9BUZ4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 DBET-201ENST00000630918 3363 ntBASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAF4Q9BUZ4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms