Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 FGFR3P6-201ENST00000457012 610 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 KRT18P56-201ENST00000507275 550 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SART3-203ENST00000546611 1184 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 AC008608.2-201ENST00000606089 416 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 REXO1L6P-202ENST00000619970 1078 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 AL161772.1-201ENST00000610494 4412 ntBASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 LINC01711-201ENST00000598340 967 ntBASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 AL353135.1-201ENST00000606729 504 ntBASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 LINC02199-201ENST00000506655 2702 ntBASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRDL1Q9BU40 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 NCF1C-201ENST00000438382 1427 ntBASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHRDL1Q9BU40 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms