Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 MIR3687-1-201ENST00000614492 61 ntBASIC13.77□□□□□ -0.21
GAFA1Q96PS6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GAFA1Q96PS6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 ELL2P1-201ENST00000413990 1906 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 AKAP8P1-201ENST00000434743 1349 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 TFAMP1-201ENST00000412727 736 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 UPF3AP3-201ENST00000420996 769 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 CEND1P1-201ENST00000451006 455 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 AC112482.1-201ENST00000492080 688 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 FAM86C2P-203ENST00000528684 1004 ntBASIC13.76□□□□□ -0.21
GAFA1Q96PS6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.76□□□□□ -0.21
GAFA1Q96PS6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 AC079328.2-201ENST00000561241 3354 ntBASIC13.75□□□□□ -0.21
GAFA1Q96PS6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 POU5F1P6-201ENST00000466990 990 ntBASIC13.75□□□□□ -0.21
GAFA1Q96PS6 YBX1P5-201ENST00000509441 847 ntBASIC13.75□□□□□ -0.21
GAFA1Q96PS6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.75□□□□□ -0.21
GAFA1Q96PS6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms