Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL022342.1-201ENST00000400363 863 ntBASIC17.15■□□□□ 0.34
C9orf72Q96LT7 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.15■□□□□ 0.34
C9orf72Q96LT7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf72Q96LT7 AC243591.1-201ENST00000452967 1364 ntBASIC17.15■□□□□ 0.34
C9orf72Q96LT7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.14■□□□□ 0.34
C9orf72Q96LT7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AP005117.1-201ENST00000584346 1413 ntBASIC17.14■□□□□ 0.33
C9orf72Q96LT7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 SCARNA2-201ENST00000458748 420 ntBASIC17.14■□□□□ 0.33
C9orf72Q96LT7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 RNA5SP419-201ENST00000515908 135 ntBASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AL596087.1-201ENST00000400979 1969 ntBASIC17.14■□□□□ 0.33
C9orf72Q96LT7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AL671710.1-201ENST00000610245 2349 ntBASIC17.14■□□□□ 0.33
C9orf72Q96LT7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C9orf72Q96LT7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 AL031284.1-201ENST00000419297 478 ntBASIC17.13■□□□□ 0.33
C9orf72Q96LT7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 RNPS1P1-201ENST00000507437 918 ntBASIC17.13■□□□□ 0.33
C9orf72Q96LT7 AC073648.2-201ENST00000510116 352 ntBASIC17.13■□□□□ 0.33
C9orf72Q96LT7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 AC013467.2-201ENST00000605472 835 ntBASIC17.13■□□□□ 0.33
C9orf72Q96LT7 AC148477.8-201ENST00000624298 468 ntBASIC17.13■□□□□ 0.33
C9orf72Q96LT7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C9orf72Q96LT7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 AC010491.1-201ENST00000563101 2797 ntBASIC17.12■□□□□ 0.33
C9orf72Q96LT7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
C9orf72Q96LT7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms