Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HMGA1P7-201ENST00000406908 502 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AL590627.1-203ENST00000421194 1026 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 MIR3909-201ENST00000579518 119 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PCDHB19P-201ENST00000570871 2371 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC11Q96DB2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 AC064836.3-201ENST00000607928 673 ntBASIC17.08■□□□□ 0.32
HDAC11Q96DB2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HDAC11Q96DB2 GPAA1P2-202ENST00000606848 1787 ntBASIC17.07■□□□□ 0.32
HDAC11Q96DB2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 RNU1-129P-201ENST00000384064 167 ntBASIC17.07■□□□□ 0.32
HDAC11Q96DB2 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 U1.21-201ENST00000580816 167 ntBASIC17.07■□□□□ 0.32
HDAC11Q96DB2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC11Q96DB2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms