Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AC006538.1-201ENST00000567905 1585 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AL355306.1-201ENST00000415580 579 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AC099522.2-201ENST00000607001 744 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AC079781.4-201ENST00000641908 219 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 WASH6P-202ENST00000359512 1437 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE4Q96A23 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AKAP8P1-201ENST00000434743 1349 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE4Q96A23 AL671710.1-201ENST00000610245 2349 ntBASIC14.91□□□□□ -0.02
CPNE4Q96A23 SNX33P1-201ENST00000592116 1762 ntBASIC14.9□□□□□ -0.02
CPNE4Q96A23 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 AL603756.1-201ENST00000606511 2163 ntBASIC14.9□□□□□ -0.02
CPNE4Q96A23 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE4Q96A23 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 AL671277.1-201ENST00000429656 993 ntBASIC14.9□□□□□ -0.02
CPNE4Q96A23 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 AC004967.1-201ENST00000453589 447 ntBASIC14.9□□□□□ -0.02
CPNE4Q96A23 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE4Q96A23 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms