Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.67□□□□□ -0.06
AP3S1Q92572 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.67□□□□□ -0.06
AP3S1Q92572 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.67□□□□□ -0.06
AP3S1Q92572 EGLN1P1-201ENST00000531623 762 ntBASIC14.67□□□□□ -0.06
AP3S1Q92572 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
AP3S1Q92572 AC005332.3-201ENST00000589904 676 ntBASIC14.67□□□□□ -0.06
AP3S1Q92572 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 AC113410.3-201ENST00000623366 203 ntBASIC14.67□□□□□ -0.06
AP3S1Q92572 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S1Q92572 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S1Q92572 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S1Q92572 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 AC003669.1-201ENST00000334569 611 ntBASIC14.66□□□□□ -0.06
AP3S1Q92572 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP3S1Q92572 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.66□□□□□ -0.06
AP3S1Q92572 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S1Q92572 POU5F1P6-201ENST00000466990 990 ntBASIC14.66□□□□□ -0.06
AP3S1Q92572 DUX4L17-201ENST00000557360 1267 ntBASIC14.66□□□□□ -0.06
AP3S1Q92572 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S1Q92572 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S1Q92572 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S1Q92572 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.66□□□□□ -0.06
AP3S1Q92572 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 AL359736.2-201ENST00000621992 437 ntBASIC14.66□□□□□ -0.06
AP3S1Q92572 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AP3S1Q92572 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.66□□□□□ -0.06
AP3S1Q92572 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AP3S1Q92572 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 KRT8P49-201ENST00000604166 1432 ntBASIC14.66□□□□□ -0.06
AP3S1Q92572 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S1Q92572 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S1Q92572 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP3S1Q92572 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP3S1Q92572 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 RBM17P1-201ENST00000453646 1190 ntBASIC14.65□□□□□ -0.06
AP3S1Q92572 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.65□□□□□ -0.06
AP3S1Q92572 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.65□□□□□ -0.06
AP3S1Q92572 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 AC006486.2-201ENST00000624246 2199 ntBASIC14.65□□□□□ -0.06
AP3S1Q92572 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.65□□□□□ -0.06
AP3S1Q92572 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S1Q92572 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
AP3S1Q92572 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S1Q92572 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.65□□□□□ -0.06
AP3S1Q92572 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP3S1Q92572 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.65□□□□□ -0.07
AP3S1Q92572 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
AP3S1Q92572 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms