Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 AL671710.1-201ENST00000610245 2349 ntBASIC16.24■□□□□ 0.19
ATL1Q8WXF7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 GGT3P-204ENST00000453783 1664 ntBASIC16.24■□□□□ 0.19
ATL1Q8WXF7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATL1Q8WXF7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.23■□□□□ 0.19
ATL1Q8WXF7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AL031731.1-201ENST00000642131 2094 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC104109.2-201ENST00000602919 1418 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 IGLL3P-201ENST00000412472 434 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 MIR3909-201ENST00000579518 119 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC021097.1-201ENST00000607902 574 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC020765.3-201ENST00000613051 740 ntBASIC16.22■□□□□ 0.19
ATL1Q8WXF7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.22■□□□□ 0.19
ATL1Q8WXF7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATL1Q8WXF7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms