Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 SPDYE17-201ENST00000412399 783 ntBASIC20.27■□□□□ 0.84
RTL9Q8NET4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RTL9Q8NET4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL9Q8NET4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RTL9Q8NET4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTL9Q8NET4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.27■□□□□ 0.83
RTL9Q8NET4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RTL9Q8NET4 GGT3P-204ENST00000453783 1664 ntBASIC20.26■□□□□ 0.83
RTL9Q8NET4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 LETM1P2-201ENST00000597330 2178 ntBASIC20.26■□□□□ 0.83
RTL9Q8NET4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 AL008721.1-201ENST00000609964 604 ntBASIC20.26■□□□□ 0.83
RTL9Q8NET4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 AL358472.5-202ENST00000641448 1267 ntBASIC20.26■□□□□ 0.83
RTL9Q8NET4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.26■□□□□ 0.83
RTL9Q8NET4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL9Q8NET4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 AP001094.4-201ENST00000579008 2176 ntBASIC20.25■□□□□ 0.83
RTL9Q8NET4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 AC010336.2-201ENST00000564226 506 ntBASIC20.25■□□□□ 0.83
RTL9Q8NET4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 AC004840.1-201ENST00000636359 365 ntBASIC20.25■□□□□ 0.83
RTL9Q8NET4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RTL9Q8NET4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL9Q8NET4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms