Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 GGT4P-201ENST00000623672 1708 ntBASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KLHDC9Q8NEP7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 AC234783.1-201ENST00000441761 496 ntBASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 KRT223P-202ENST00000449164 1292 ntBASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 AC015936.2-201ENST00000593177 259 ntBASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 RNF165-205ENST00000588679 2904 ntBASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KLHDC9Q8NEP7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 TIMM17BP1-201ENST00000545713 516 ntBASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AC092552.1-201ENST00000547243 906 ntBASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AC133552.6-201ENST00000613406 534 ntBASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 RPSAP52-203ENST00000622976 1023 ntBASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 AC068880.1-201ENST00000507289 2297 ntBASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KLHDC9Q8NEP7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ANKRD19P-201ENST00000338192 862 ntBASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 CROCCP4-201ENST00000457096 498 ntBASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.05■□□□□ 0.48
KLHDC9Q8NEP7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms