Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 AL049757.1-201ENST00000616842 1596 ntBASIC16.2■□□□□ 0.18
HIPK4Q8NE63 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIPK4Q8NE63 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 FAM220CP-201ENST00000395253 831 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 TSPY22P-201ENST00000427496 604 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AC063952.2-201ENST00000498792 1227 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 LINC01023-201ENST00000606054 436 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AL138831.2-201ENST00000606564 490 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AC124864.1-201ENST00000623408 392 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.19■□□□□ 0.18
HIPK4Q8NE63 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HIPK4Q8NE63 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 AL603832.2-201ENST00000566195 2125 ntBASIC16.18■□□□□ 0.18
HIPK4Q8NE63 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 AC211429.1-201ENST00000415277 523 ntBASIC16.18■□□□□ 0.18
HIPK4Q8NE63 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 AL671277.2-201ENST00000458060 996 ntBASIC16.18■□□□□ 0.18
HIPK4Q8NE63 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.18■□□□□ 0.18
HIPK4Q8NE63 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIPK4Q8NE63 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms