Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 MED15P5-201ENST00000423150 992 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 KRT18P3-201ENST00000451602 1288 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AC109635.5-201ENST00000533593 962 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AL009183.1-201ENST00000603760 355 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AC140113.2-201ENST00000604370 208 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AC140658.5-201ENST00000438532 169 ntBASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM35BQ8NCS4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM35BQ8NCS4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms