Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 AC005915.1-201ENST00000624912 2018 ntBASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC38A9Q8NBW4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AL031731.1-201ENST00000642131 2094 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 FAM220BP-201ENST00000377689 816 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC002472.2-201ENST00000442739 958 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC098859.1-201ENST00000502915 1238 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AP002490.2-201ENST00000524791 560 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC027369.6-201ENST00000525520 931 ntBASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC38A9Q8NBW4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC004890.2-204ENST00000481968 304 ntBASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AL590560.3-201ENST00000623350 461 ntBASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 AC105020.1-201ENST00000435356 2205 ntBASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC38A9Q8NBW4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC38A9Q8NBW4 RNF216P1-203ENST00000404404 2427 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms