Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP11CQ8NB49 AC004877.2-201ENST00000623941 599 ntBASIC17.34■□□□□ 0.37
ATP11CQ8NB49 AC002310.6-201ENST00000624451 1377 ntBASIC17.34■□□□□ 0.37
ATP11CQ8NB49 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP11CQ8NB49 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP11CQ8NB49 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATP11CQ8NB49 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP11CQ8NB49 AC008741.2-201ENST00000612792 3115 ntBASIC17.33■□□□□ 0.37
ATP11CQ8NB49 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 CICP6-201ENST00000457191 2729 ntBASIC17.33■□□□□ 0.36
ATP11CQ8NB49 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 BCAR1-209ENST00000546196 1340 ntBASIC17.33■□□□□ 0.36
ATP11CQ8NB49 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 AC092865.6-201ENST00000642101 219 ntBASIC17.33■□□□□ 0.36
ATP11CQ8NB49 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP11CQ8NB49 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 YBX2P1-201ENST00000394192 760 ntBASIC17.32■□□□□ 0.36
ATP11CQ8NB49 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AC004832.2-201ENST00000426397 482 ntBASIC17.32■□□□□ 0.36
ATP11CQ8NB49 FAM185BP-201ENST00000443595 716 ntBASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AL513190.1-201ENST00000621254 727 ntBASIC17.32■□□□□ 0.36
ATP11CQ8NB49 AC007064.4-201ENST00000637740 555 ntBASIC17.32■□□□□ 0.36
ATP11CQ8NB49 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP11CQ8NB49 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP11CQ8NB49 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP11CQ8NB49 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms