Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC105339.1-204ENST00000636249 355 ntBASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 AL391256.1-201ENST00000443260 1855 ntBASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 MIR3197-201ENST00000582241 73 ntBASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 AC092364.2-201ENST00000596710 2692 ntBASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
CCDC33Q8N5R6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 AC092364.2-202ENST00000597012 1073 ntBASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC33Q8N5R6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms