Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.17■□□□□ 0.34
SCML4Q8N228 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.16■□□□□ 0.34
SCML4Q8N228 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC084018.2-201ENST00000613093 2607 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 RBPMS2P1-201ENST00000437762 623 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 SPDYE14P-201ENST00000442619 822 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.16■□□□□ 0.34
SCML4Q8N228 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.16■□□□□ 0.34
SCML4Q8N228 AL365330.1-201ENST00000607459 531 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.16■□□□□ 0.34
SCML4Q8N228 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.16■□□□□ 0.34
SCML4Q8N228 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.16■□□□□ 0.34
SCML4Q8N228 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 KRT18P28-201ENST00000453838 1332 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SCML4Q8N228 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 AL592424.1-201ENST00000563624 1536 ntBASIC17.16■□□□□ 0.34
SCML4Q8N228 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCML4Q8N228 AC092171.3-201ENST00000610122 2651 ntBASIC17.15■□□□□ 0.34
SCML4Q8N228 AP3S2-216ENST00000617003 1561 ntBASIC17.15■□□□□ 0.34
SCML4Q8N228 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SCML4Q8N228 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
SCML4Q8N228 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.15■□□□□ 0.34
SCML4Q8N228 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCML4Q8N228 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.15■□□□□ 0.34
SCML4Q8N228 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.15■□□□□ 0.34
SCML4Q8N228 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 RARRES2P9-201ENST00000565168 469 ntBASIC17.15■□□□□ 0.34
SCML4Q8N228 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 AC024267.1-201ENST00000582320 895 ntBASIC17.15■□□□□ 0.34
SCML4Q8N228 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.15■□□□□ 0.34
SCML4Q8N228 LINC00628-201ENST00000628516 1289 ntBASIC17.15■□□□□ 0.34
SCML4Q8N228 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.15■□□□□ 0.34
SCML4Q8N228 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCML4Q8N228 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SCML4Q8N228 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCML4Q8N228 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SCML4Q8N228 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms