Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 AC116562.4-202ENST00000641738 218 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CROCCP3Q8IVE0 AC005912.2-201ENST00000619492 2400 ntBASIC15.08■□□□□ 0.01
CROCCP3Q8IVE0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CROCCP3Q8IVE0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CROCCP3Q8IVE0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 EGFEM1P-202ENST00000431685 1563 ntBASIC15.08■□□□□ 0
CROCCP3Q8IVE0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 AC024243.1-201ENST00000609234 778 ntBASIC15.08■□□□□ 0
CROCCP3Q8IVE0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 AC007326.2-201ENST00000624224 7579 ntBASIC15.08■□□□□ 0
CROCCP3Q8IVE0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CROCCP3Q8IVE0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC126335.2-201ENST00000623362 4637 ntBASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.07■□□□□ 0
CROCCP3Q8IVE0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms