Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC009053.2-201ENST00000563701 2365 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 TSEN15P1-201ENST00000423257 515 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC105233.2-201ENST00000523697 349 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AF228730.5-201ENST00000530288 346 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC093520.2-201ENST00000561830 333 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AL138918.1-201ENST00000568306 659 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC009093.7-201ENST00000623853 1223 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 CROCCP1-201ENST00000426910 5675 ntBASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 KRT18P28-201ENST00000453838 1332 ntBASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 METTL21AP1-201ENST00000438852 635 ntBASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 AP000842.3-202ENST00000569238 1080 ntBASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 UBALD1-205ENST00000590891 2641 ntBASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 GGT3P-204ENST00000453783 1664 ntBASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM4Q86VH4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AC073439.1-201ENST00000624121 1774 ntBASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 PCGF3-213ENST00000620529 1899 ntBASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms