Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 IGHV3-71-201ENST00000523324 359 ntBASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RAI1Q7Z5J4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 AC079776.1-201ENST00000401540 1152 ntBASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 U91328.1-201ENST00000437528 223 ntBASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 AC093724.1-201ENST00000448659 1027 ntBASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAI1Q7Z5J4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 BTBD7P1-201ENST00000447253 1453 ntBASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 KRT8P39-201ENST00000396270 1433 ntBASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 AL391825.1-201ENST00000457671 1364 ntBASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 KRT8P12-202ENST00000472924 1397 ntBASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAI1Q7Z5J4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms