Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COBLL1Q53SF7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COBLL1Q53SF7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 CDC14C-201ENST00000428251 1719 ntBASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AC069224.1-201ENST00000566372 1715 ntBASIC18.16■□□□□ 0.5
COBLL1Q53SF7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.16■□□□□ 0.5
COBLL1Q53SF7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AC112504.1-201ENST00000623415 1841 ntBASIC18.16■□□□□ 0.5
COBLL1Q53SF7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COBLL1Q53SF7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
COBLL1Q53SF7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.14■□□□□ 0.5
COBLL1Q53SF7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COBLL1Q53SF7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms