Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC112504.1-201ENST00000623415 1841 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CDC14C-201ENST00000428251 1719 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 LINC02447-202ENST00000501888 2146 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.83□□□□□ -0.19
ANKRD55Q3KP44 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ANKRD55Q3KP44 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
ANKRD55Q3KP44 FLJ16779-201ENST00000612722 7638 ntBASIC13.83□□□□□ -0.19
ANKRD55Q3KP44 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ANKRD55Q3KP44 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ANKRD55Q3KP44 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AC063926.3-201ENST00000624734 5658 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 HBZP1-201ENST00000354915 429 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AP002414.1-201ENST00000391405 1147 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 NUS1P1-201ENST00000446295 882 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 VENTXP5-201ENST00000523979 775 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AD001527.2-201ENST00000622994 785 ntBASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ANKRD55Q3KP44 REXO1L8P-201ENST00000604378 1897 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms