Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNB3Q15768 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB3Q15768 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNB3Q15768 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
EFNB3Q15768 AL671710.1-201ENST00000610245 2349 ntBASIC14.14□□□□□ -0.15
EFNB3Q15768 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB3Q15768 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
EFNB3Q15768 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
EFNB3Q15768 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB3Q15768 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB3Q15768 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB3Q15768 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
EFNB3Q15768 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.13□□□□□ -0.15
EFNB3Q15768 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 ALG1L8P-201ENST00000533887 760 ntBASIC14.13□□□□□ -0.15
EFNB3Q15768 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNB3Q15768 AL138918.1-201ENST00000568306 659 ntBASIC14.13□□□□□ -0.15
EFNB3Q15768 AC051619.7-201ENST00000568314 623 ntBASIC14.13□□□□□ -0.15
EFNB3Q15768 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNB3Q15768 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.13□□□□□ -0.15
EFNB3Q15768 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB3Q15768 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB3Q15768 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB3Q15768 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 MIR770-201ENST00000390219 98 ntBASIC14.12□□□□□ -0.15
EFNB3Q15768 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNB3Q15768 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNB3Q15768 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 AC093512.1-201ENST00000617969 520 ntBASIC14.12□□□□□ -0.15
EFNB3Q15768 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.12□□□□□ -0.15
EFNB3Q15768 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 AC060834.1-201ENST00000443027 2032 ntBASIC14.12□□□□□ -0.15
EFNB3Q15768 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB3Q15768 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB3Q15768 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EFNB3Q15768 AL118508.1-201ENST00000613502 2345 ntBASIC14.12□□□□□ -0.15
EFNB3Q15768 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
EFNB3Q15768 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB3Q15768 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB3Q15768 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms