Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PC-208ENST00000529047 1607 ntTSL 3 BASIC10.49□□□□□ -0.73
RBM3P98179 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.49□□□□□ -0.73
RBM3P98179 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 KRT18P29-201ENST00000397031 1267 ntBASIC10.49□□□□□ -0.73
RBM3P98179 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.49□□□□□ -0.73
RBM3P98179 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 AP000692.2-201ENST00000608391 879 ntBASIC10.49□□□□□ -0.73
RBM3P98179 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 DMBT1P1-203ENST00000636837 4628 ntBASIC10.49□□□□□ -0.73
RBM3P98179 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RBM3P98179 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
RBM3P98179 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC10.49□□□□□ -0.73
RBM3P98179 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RBM3P98179 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RBM3P98179 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.48□□□□□ -0.73
RBM3P98179 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.48□□□□□ -0.73
RBM3P98179 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.48□□□□□ -0.73
RBM3P98179 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 SNX18-202ENST00000343017 3140 ntBASIC10.48□□□□□ -0.73
RBM3P98179 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RBM3P98179 AC004911.1-201ENST00000416316 871 ntBASIC10.48□□□□□ -0.73
RBM3P98179 PPP1R14BP2-201ENST00000426284 444 ntBASIC10.48□□□□□ -0.73
RBM3P98179 KRT18P5-201ENST00000436075 1291 ntBASIC10.48□□□□□ -0.73
RBM3P98179 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC10.48□□□□□ -0.73
RBM3P98179 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
RBM3P98179 AC113404.2-201ENST00000507884 177 ntBASIC10.48□□□□□ -0.73
RBM3P98179 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RBM3P98179 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC10.48□□□□□ -0.73
RBM3P98179 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC10.48□□□□□ -0.73
RBM3P98179 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC10.48□□□□□ -0.73
RBM3P98179 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC10.48□□□□□ -0.73
RBM3P98179 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms