Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP1P78357 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP1P78357 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AC010319.3-201ENST00000597028 470 ntBASIC19.5■□□□□ 0.71
CNTNAP1P78357 AC233724.13-201ENST00000598383 410 ntBASIC19.5■□□□□ 0.71
CNTNAP1P78357 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CNTNAP1P78357 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNTNAP1P78357 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 FAM21FP-201ENST00000426241 1131 ntBASIC19.49■□□□□ 0.71
CNTNAP1P78357 CSF2RBP1-201ENST00000447905 391 ntBASIC19.49■□□□□ 0.71
CNTNAP1P78357 AC061975.2-201ENST00000581722 295 ntBASIC19.49■□□□□ 0.71
CNTNAP1P78357 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNTNAP1P78357 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
CNTNAP1P78357 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 AC068880.1-201ENST00000507289 2297 ntBASIC19.48■□□□□ 0.71
CNTNAP1P78357 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 FXNP2-201ENST00000411625 547 ntBASIC19.48■□□□□ 0.71
CNTNAP1P78357 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 AC007551.1-201ENST00000457394 519 ntBASIC19.48■□□□□ 0.71
CNTNAP1P78357 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTNAP1P78357 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTNAP1P78357 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTNAP1P78357 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CNTNAP1P78357 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CNTNAP1P78357 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.47■□□□□ 0.71
CNTNAP1P78357 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTNAP1P78357 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CNTNAP1P78357 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms