Protein–RNA interactions for Protein: P59894

DCDC1, Doublecortin domain-containing protein 1, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCDC1P59894 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DCDC1P59894 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DCDC1P59894 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DCDC1P59894 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.41■□□□□ 0.22
DCDC1P59894 AC004461.1-201ENST00000412461 403 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.41■□□□□ 0.22
DCDC1P59894 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
DCDC1P59894 PRYP6-201ENST00000514804 343 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 AC105233.2-201ENST00000523697 349 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 AF228730.5-201ENST00000530288 346 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.41■□□□□ 0.22
DCDC1P59894 LINC01225-203ENST00000563550 1244 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 GPALPP1-207ENST00000611650 899 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 AL691403.2-201ENST00000618460 490 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 UBALD1-205ENST00000590891 2641 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DCDC1P59894 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.41■□□□□ 0.22
DCDC1P59894 AC073439.1-201ENST00000624121 1774 ntBASIC16.41■□□□□ 0.22
DCDC1P59894 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 DNAJB3-202ENST00000449667 1266 ntBASIC16.4■□□□□ 0.22
DCDC1P59894 POU5F1P6-201ENST00000466990 990 ntBASIC16.4■□□□□ 0.22
DCDC1P59894 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.4■□□□□ 0.22
DCDC1P59894 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
DCDC1P59894 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
DCDC1P59894 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.4■□□□□ 0.22
DCDC1P59894 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
DCDC1P59894 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DCDC1P59894 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.39■□□□□ 0.22
DCDC1P59894 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
DCDC1P59894 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DCDC1P59894 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
DCDC1P59894 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DCDC1P59894 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DCDC1P59894 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
DCDC1P59894 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DCDC1P59894 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.39■□□□□ 0.21
DCDC1P59894 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DCDC1P59894 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DCDC1P59894 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.39■□□□□ 0.21
DCDC1P59894 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
DCDC1P59894 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DCDC1P59894 CNN2P11-201ENST00000429351 262 ntBASIC16.39■□□□□ 0.21
DCDC1P59894 AL592309.1-201ENST00000443127 649 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms