Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP4BP1P59074 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 AL627223.1-201ENST00000416693 442 ntBASIC18.98■□□□□ 0.63
CHMP4BP1P59074 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 AC099522.2-201ENST00000607001 744 ntBASIC18.98■□□□□ 0.63
CHMP4BP1P59074 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHMP4BP1P59074 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 SPCS2P1-201ENST00000561636 679 ntBASIC18.97■□□□□ 0.63
CHMP4BP1P59074 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 Z92544.3-201ENST00000624747 417 ntBASIC18.97■□□□□ 0.63
CHMP4BP1P59074 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP4BP1P59074 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AC092474.2-201ENST00000424288 719 ntBASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AC140658.5-201ENST00000438532 169 ntBASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms