Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 POU5F1P6-201ENST00000466990 990 ntBASIC15.56■□□□□ 0.08
RAB38P57729 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.56■□□□□ 0.08
RAB38P57729 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 AC243562.1-201ENST00000560672 389 ntBASIC15.56■□□□□ 0.08
RAB38P57729 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB38P57729 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.56■□□□□ 0.08
RAB38P57729 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 ALOX12P2-203ENST00000570921 1945 ntBASIC15.56■□□□□ 0.08
RAB38P57729 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 ME2P1-201ENST00000426028 1970 ntBASIC15.56■□□□□ 0.08
RAB38P57729 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB38P57729 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB38P57729 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB38P57729 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RAB38P57729 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 AC079140.1-201ENST00000508039 487 ntBASIC15.55■□□□□ 0.08
RAB38P57729 PRYP6-201ENST00000514804 343 ntBASIC15.55■□□□□ 0.08
RAB38P57729 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB38P57729 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB38P57729 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB38P57729 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 AC008267.7-201ENST00000624570 1194 ntBASIC15.55■□□□□ 0.08
RAB38P57729 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.55■□□□□ 0.08
RAB38P57729 AC105339.1-204ENST00000636249 355 ntBASIC15.55■□□□□ 0.08
RAB38P57729 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB38P57729 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms