Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 FRMD8P1-201ENST00000440433 1524 ntBASIC15.88■□□□□ 0.13
CLDN6P56747 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 SPDYE19P-201ENST00000338590 713 ntBASIC15.87■□□□□ 0.13
CLDN6P56747 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 MIR658-201ENST00000385210 100 ntBASIC15.87■□□□□ 0.13
CLDN6P56747 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.87■□□□□ 0.13
CLDN6P56747 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 ACA64.2-201ENST00000459014 129 ntBASIC15.87■□□□□ 0.13
CLDN6P56747 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN6P56747 AC105021.1-202ENST00000570572 669 ntBASIC15.87■□□□□ 0.13
CLDN6P56747 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 AC017083.2-201ENST00000608069 979 ntBASIC15.87■□□□□ 0.13
CLDN6P56747 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN6P56747 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN6P56747 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN6P56747 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 KRT8P49-201ENST00000604166 1432 ntBASIC15.86■□□□□ 0.13
CLDN6P56747 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLDN6P56747 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 AC073439.1-201ENST00000624121 1774 ntBASIC15.86■□□□□ 0.13
CLDN6P56747 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 AL512384.1-201ENST00000406683 331 ntBASIC15.86■□□□□ 0.13
CLDN6P56747 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 AL080243.2-201ENST00000418783 582 ntBASIC15.86■□□□□ 0.13
CLDN6P56747 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.86■□□□□ 0.13
CLDN6P56747 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CLDN6P56747 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN6P56747 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 AL035456.1-201ENST00000456064 1369 ntBASIC15.86■□□□□ 0.13
CLDN6P56747 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN6P56747 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN6P56747 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms