Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FOXG1P55316 AL662844.4-201ENST00000606367 2838 ntBASIC14.52□□□□□ -0.09
FOXG1P55316 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
FOXG1P55316 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FOXG1P55316 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
FOXG1P55316 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.52□□□□□ -0.09
FOXG1P55316 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 AC073439.1-201ENST00000624121 1774 ntBASIC14.52□□□□□ -0.09
FOXG1P55316 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
FOXG1P55316 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXG1P55316 FOXO1B-201ENST00000504678 1527 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 UXT-AS1-201ENST00000590504 1525 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FOXG1P55316 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.51□□□□□ -0.09
FOXG1P55316 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FOXG1P55316 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.51□□□□□ -0.09
FOXG1P55316 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 IGHV3-62-201ENST00000520057 340 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 SLC25A39P2-201ENST00000537614 270 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.51□□□□□ -0.09
FOXG1P55316 AP000842.3-202ENST00000569238 1080 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.51□□□□□ -0.09
FOXG1P55316 AC008267.7-201ENST00000624570 1194 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
FOXG1P55316 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.51□□□□□ -0.09
FOXG1P55316 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FOXG1P55316 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 AC084018.2-201ENST00000613093 2607 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXG1P55316 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXG1P55316 PCDH8P1-201ENST00000428983 2773 ntBASIC14.51□□□□□ -0.09
FOXG1P55316 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 PCGF3-213ENST00000620529 1899 ntBASIC14.5□□□□□ -0.09
FOXG1P55316 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 METTL21AP1-201ENST00000438852 635 ntBASIC14.5□□□□□ -0.09
FOXG1P55316 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 AC023141.5-201ENST00000458585 616 ntBASIC14.5□□□□□ -0.09
FOXG1P55316 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 AC109322.1-201ENST00000524499 1264 ntBASIC14.5□□□□□ -0.09
FOXG1P55316 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.5□□□□□ -0.09
FOXG1P55316 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.5□□□□□ -0.09
FOXG1P55316 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
FOXG1P55316 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms