Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 AP000842.3-202ENST00000569238 1080 ntBASIC18.11■□□□□ 0.49
NCKAP1LP55160 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1LP55160 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1LP55160 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AC004835.2-201ENST00000603762 682 ntBASIC18.1■□□□□ 0.49
NCKAP1LP55160 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1LP55160 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1LP55160 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 AC005622.1-201ENST00000636801 1703 ntBASIC18.09■□□□□ 0.49
NCKAP1LP55160 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 AL627223.1-201ENST00000416693 442 ntBASIC18.09■□□□□ 0.49
NCKAP1LP55160 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 CNN2P11-201ENST00000429351 262 ntBASIC18.09■□□□□ 0.49
NCKAP1LP55160 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 IGHV3-62-201ENST00000520057 340 ntBASIC18.09■□□□□ 0.49
NCKAP1LP55160 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1LP55160 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1LP55160 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKAP1LP55160 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.08■□□□□ 0.49
NCKAP1LP55160 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms