Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NR1H2P55055 CICP13-201ENST00000422015 2789 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 FDX1P1-201ENST00000449115 551 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 RN7SL606P-201ENST00000472779 293 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.81■□□□□ 0.12
NR1H2P55055 LINC00167-201ENST00000530583 1419 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.81■□□□□ 0.12
NR1H2P55055 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NR1H2P55055 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.81■□□□□ 0.12
NR1H2P55055 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NR1H2P55055 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.81■□□□□ 0.12
NR1H2P55055 AC099336.1-202ENST00000602961 463 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 AL732292.2-201ENST00000609649 430 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H2P55055 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NR1H2P55055 AC138035.3-201ENST00000622706 2791 ntBASIC15.81■□□□□ 0.12
NR1H2P55055 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H2P55055 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NR1H2P55055 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NR1H2P55055 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.8■□□□□ 0.12
NR1H2P55055 AC113404.2-201ENST00000507884 177 ntBASIC15.8■□□□□ 0.12
NR1H2P55055 AC138894.3-201ENST00000603787 634 ntBASIC15.8■□□□□ 0.12
NR1H2P55055 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.8■□□□□ 0.12
NR1H2P55055 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.8■□□□□ 0.12
NR1H2P55055 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.8■□□□□ 0.12
NR1H2P55055 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 AL603832.2-201ENST00000566195 2125 ntBASIC15.8■□□□□ 0.12
NR1H2P55055 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 ME2P1-201ENST00000426028 1970 ntBASIC15.8■□□□□ 0.12
NR1H2P55055 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NR1H2P55055 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.79■□□□□ 0.12
NR1H2P55055 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 KRT8P10-201ENST00000450021 1447 ntBASIC15.79■□□□□ 0.12
NR1H2P55055 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms