Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 KRT8P12-202ENST00000472924 1397 ntBASIC19■□□□□ 0.63
HMGCS2P54868 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19■□□□□ 0.63
HMGCS2P54868 GPAA1P2-202ENST00000606848 1787 ntBASIC19■□□□□ 0.63
HMGCS2P54868 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 AL031731.1-201ENST00000642131 2094 ntBASIC19■□□□□ 0.63
HMGCS2P54868 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19■□□□□ 0.63
HMGCS2P54868 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HMGCS2P54868 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCS2P54868 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HMGCS2P54868 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
HMGCS2P54868 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCS2P54868 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.99■□□□□ 0.63
HMGCS2P54868 AC132938.2-201ENST00000579188 680 ntBASIC18.99■□□□□ 0.63
HMGCS2P54868 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 AC007431.3-201ENST00000623221 587 ntBASIC18.99■□□□□ 0.63
HMGCS2P54868 AL591163.1-201ENST00000641757 987 ntBASIC18.99■□□□□ 0.63
HMGCS2P54868 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCS2P54868 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS2P54868 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS2P54868 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.99■□□□□ 0.63
HMGCS2P54868 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCS2P54868 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGCS2P54868 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS2P54868 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS2P54868 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCS2P54868 AP002490.2-201ENST00000524791 560 ntBASIC18.98■□□□□ 0.63
HMGCS2P54868 AC026979.3-201ENST00000607315 403 ntBASIC18.98■□□□□ 0.63
HMGCS2P54868 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCS2P54868 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS2P54868 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCS2P54868 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGCS2P54868 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS2P54868 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS2P54868 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGCS2P54868 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 SLC7A15P-201ENST00000424028 1363 ntBASIC18.97■□□□□ 0.63
HMGCS2P54868 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.97■□□□□ 0.63
HMGCS2P54868 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCS2P54868 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGCS2P54868 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCS2P54868 AL512384.1-201ENST00000406683 331 ntBASIC18.97■□□□□ 0.63
HMGCS2P54868 SPDYE17-201ENST00000412399 783 ntBASIC18.97■□□□□ 0.63
HMGCS2P54868 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
HMGCS2P54868 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGCS2P54868 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCS2P54868 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGCS2P54868 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.97■□□□□ 0.63
HMGCS2P54868 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.97■□□□□ 0.63
HMGCS2P54868 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms