Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.02■□□□□ 0.32
ATXN3P54252 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ATXN3P54252 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.02■□□□□ 0.32
ATXN3P54252 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATXN3P54252 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATXN3P54252 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATXN3P54252 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.02■□□□□ 0.31
ATXN3P54252 DOC2GP-204ENST00000639052 2548 ntBASIC17.02■□□□□ 0.31
ATXN3P54252 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATXN3P54252 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATXN3P54252 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ATXN3P54252 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ATXN3P54252 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 LINC00304-203ENST00000565008 1864 ntBASIC17.01■□□□□ 0.31
ATXN3P54252 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 MYCLP1-201ENST00000372451 1075 ntBASIC17.01■□□□□ 0.31
ATXN3P54252 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.01■□□□□ 0.31
ATXN3P54252 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ATXN3P54252 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.01■□□□□ 0.31
ATXN3P54252 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATXN3P54252 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATXN3P54252 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 AC060834.1-201ENST00000443027 2032 ntBASIC17.01■□□□□ 0.31
ATXN3P54252 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATXN3P54252 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.01■□□□□ 0.31
ATXN3P54252 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATXN3P54252 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
ATXN3P54252 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 AC002056.1-201ENST00000395613 760 ntBASIC17■□□□□ 0.31
ATXN3P54252 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17■□□□□ 0.31
ATXN3P54252 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 AC005237.2-201ENST00000434368 219 ntBASIC17■□□□□ 0.31
ATXN3P54252 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17■□□□□ 0.31
ATXN3P54252 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17■□□□□ 0.31
ATXN3P54252 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17■□□□□ 0.31
ATXN3P54252 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 AJ011932.1-201ENST00000621707 465 ntBASIC17■□□□□ 0.31
ATXN3P54252 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17■□□□□ 0.31
ATXN3P54252 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
ATXN3P54252 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATXN3P54252 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17■□□□□ 0.31
ATXN3P54252 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATXN3P54252 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17■□□□□ 0.31
ATXN3P54252 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATXN3P54252 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATXN3P54252 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.99■□□□□ 0.31
ATXN3P54252 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATXN3P54252 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATXN3P54252 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATXN3P54252 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms