Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC112492.5-201ENST00000421897 457 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.34■■□□□ 1.33
CLTCL1P53675 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.34■■□□□ 1.33
CLTCL1P53675 RNF165-205ENST00000588679 2904 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 AC008735.3-201ENST00000596646 500 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 AC093726.1-201ENST00000608064 963 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 MIR6752-201ENST00000618442 71 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.34■■□□□ 1.33
CLTCL1P53675 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC23.34■■□□□ 1.33
CLTCL1P53675 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
CLTCL1P53675 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
CLTCL1P53675 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 RHOA-206ENST00000454011 889 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 USP32P1-208ENST00000506594 1164 ntBASIC23.33■■□□□ 1.33
CLTCL1P53675 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 SPIB-207ENST00000597855 564 ntTSL 4 BASIC23.33■■□□□ 1.33
CLTCL1P53675 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC23.33■■□□□ 1.33
CLTCL1P53675 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CLTCL1P53675 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC23.33■■□□□ 1.33
CLTCL1P53675 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLTCL1P53675 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC23.33■■□□□ 1.33
CLTCL1P53675 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
CLTCL1P53675 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
CLTCL1P53675 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.32
CLTCL1P53675 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC23.33■■□□□ 1.32
CLTCL1P53675 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC23.33■■□□□ 1.32
CLTCL1P53675 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
CLTCL1P53675 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.33■■□□□ 1.32
CLTCL1P53675 PAM16-215ENST00000577031 548 ntTSL 4 BASIC23.33■■□□□ 1.32
CLTCL1P53675 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CLTCL1P53675 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC23.32■■□□□ 1.32
CLTCL1P53675 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CLTCL1P53675 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC23.32■■□□□ 1.32
CLTCL1P53675 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC23.32■■□□□ 1.32
CLTCL1P53675 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 LINC01144-201ENST00000626198 1710 ntBASIC23.32■■□□□ 1.32
CLTCL1P53675 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.32■■□□□ 1.32
CLTCL1P53675 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.32■■□□□ 1.32
CLTCL1P53675 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC23.32■■□□□ 1.32
CLTCL1P53675 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CLTCL1P53675 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLTCL1P53675 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CLTCL1P53675 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC23.31■■□□□ 1.32
CLTCL1P53675 UBALD1-205ENST00000590891 2641 ntBASIC23.31■■□□□ 1.32
CLTCL1P53675 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 MYCLP2-201ENST00000449268 967 ntBASIC23.31■■□□□ 1.32
CLTCL1P53675 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CLTCL1P53675 AL359881.2-201ENST00000602973 570 ntBASIC23.31■■□□□ 1.32
CLTCL1P53675 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CLTCL1P53675 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 AL592424.1-201ENST00000563624 1536 ntBASIC23.31■■□□□ 1.32
CLTCL1P53675 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLTCL1P53675 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC23.31■■□□□ 1.32
CLTCL1P53675 LETM1P2-201ENST00000597330 2178 ntBASIC23.31■■□□□ 1.32
CLTCL1P53675 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.3■■□□□ 1.32
CLTCL1P53675 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC23.3■■□□□ 1.32
CLTCL1P53675 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 SUOX-214ENST00000551841 906 ntTSL 3 BASIC23.3■■□□□ 1.32
CLTCL1P53675 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC23.3■■□□□ 1.32
CLTCL1P53675 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
CLTCL1P53675 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms