Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCN3P51790 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN3P51790 AC020765.3-201ENST00000613051 740 ntBASIC18.15■□□□□ 0.5
CLCN3P51790 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN3P51790 SPDYE12P-201ENST00000618416 771 ntBASIC18.15■□□□□ 0.5
CLCN3P51790 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN3P51790 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN3P51790 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLCN3P51790 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN3P51790 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLCN3P51790 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN3P51790 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCN3P51790 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN3P51790 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.14■□□□□ 0.5
CLCN3P51790 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN3P51790 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CLCN3P51790 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN3P51790 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLCN3P51790 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN3P51790 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCN3P51790 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN3P51790 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.14■□□□□ 0.49
CLCN3P51790 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN3P51790 AC073592.8-201ENST00000624126 511 ntBASIC18.14■□□□□ 0.49
CLCN3P51790 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN3P51790 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLCN3P51790 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CLCN3P51790 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN3P51790 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCN3P51790 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN3P51790 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 MIR661-201ENST00000384842 89 ntBASIC18.13■□□□□ 0.49
CLCN3P51790 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 HLA-J-202ENST00000469281 1241 ntBASIC18.13■□□□□ 0.49
CLCN3P51790 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN3P51790 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN3P51790 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN3P51790 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN3P51790 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN3P51790 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLCN3P51790 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN3P51790 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLCN3P51790 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.12■□□□□ 0.49
CLCN3P51790 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN3P51790 AL353705.2-201ENST00000428243 662 ntBASIC18.12■□□□□ 0.49
CLCN3P51790 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN3P51790 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 AC027369.6-201ENST00000525520 931 ntBASIC18.12■□□□□ 0.49
CLCN3P51790 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CLCN3P51790 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN3P51790 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.12■□□□□ 0.49
CLCN3P51790 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN3P51790 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN3P51790 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CLCN3P51790 AL138828.2-201ENST00000615812 383 ntBASIC18.12■□□□□ 0.49
CLCN3P51790 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms