Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.93■□□□□ 0.14
HLCSP50747 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.93■□□□□ 0.14
HLCSP50747 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLCSP50747 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.93■□□□□ 0.14
HLCSP50747 AL136379.1-201ENST00000623471 2642 ntBASIC15.93■□□□□ 0.14
HLCSP50747 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLCSP50747 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLCSP50747 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLCSP50747 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLCSP50747 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
HLCSP50747 PGAM5P1-201ENST00000518923 814 ntBASIC15.92■□□□□ 0.14
HLCSP50747 IGHV3-65-201ENST00000523210 341 ntBASIC15.92■□□□□ 0.14
HLCSP50747 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.92■□□□□ 0.14
HLCSP50747 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HLCSP50747 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLCSP50747 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.92■□□□□ 0.14
HLCSP50747 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.92■□□□□ 0.14
HLCSP50747 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLCSP50747 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 AC126177.1-201ENST00000547829 2218 ntBASIC15.91■□□□□ 0.14
HLCSP50747 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.91■□□□□ 0.14
HLCSP50747 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 KRT18P13-201ENST00000400056 1290 ntBASIC15.91■□□□□ 0.14
HLCSP50747 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 AC124947.2-201ENST00000547118 1133 ntBASIC15.91■□□□□ 0.14
HLCSP50747 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.91■□□□□ 0.14
HLCSP50747 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.91■□□□□ 0.14
HLCSP50747 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 GPALPP1-207ENST00000611650 899 ntBASIC15.91■□□□□ 0.14
HLCSP50747 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLCSP50747 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.91■□□□□ 0.14
HLCSP50747 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms