Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.04■□□□□ 0.48
TNNT3P45378 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNNT3P45378 IER3-202ENST00000376377 1350 ntBASIC18.04■□□□□ 0.48
TNNT3P45378 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNNT3P45378 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TNNT3P45378 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TNNT3P45378 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TNNT3P45378 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.03■□□□□ 0.48
TNNT3P45378 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TNNT3P45378 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TNNT3P45378 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNNT3P45378 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 STK40-201ENST00000359297 4837 ntTSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.02■□□□□ 0.48
TNNT3P45378 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TNNT3P45378 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TNNT3P45378 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 MIR1224-201ENST00000408193 85 ntBASIC18.02■□□□□ 0.48
TNNT3P45378 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 AC005104.2-201ENST00000427818 678 ntBASIC18.02■□□□□ 0.48
TNNT3P45378 CHCHD2P8-201ENST00000429873 447 ntBASIC18.02■□□□□ 0.48
TNNT3P45378 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TNNT3P45378 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.02■□□□□ 0.48
TNNT3P45378 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 FAM86EP-206ENST00000510506 987 ntBASIC18.02■□□□□ 0.48
TNNT3P45378 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.02■□□□□ 0.48
TNNT3P45378 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.02■□□□□ 0.48
TNNT3P45378 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNNT3P45378 AL592071.1-201ENST00000611956 408 ntBASIC18.02■□□□□ 0.48
TNNT3P45378 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.02■□□□□ 0.48
TNNT3P45378 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.02■□□□□ 0.47
TNNT3P45378 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNNT3P45378 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.01■□□□□ 0.47
TNNT3P45378 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.01■□□□□ 0.47
TNNT3P45378 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNNT3P45378 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms